RecruitingNCT03911531

Whole Exome Sequencing and Whole Genome Sequencing for Nonimmune Fetal/Neonatal Hydrops


Sponsor

Thomas Jefferson University

Enrollment

55 participants

Start Date

Jan 15, 2019

Study Type

OBSERVATIONAL

Conditions

Summary

Brief Summary: Nonimmune hydrops fetalis (NIHF) is a potentially fatal condition characterized by abnormal fluid accumulation in two or more fetal compartments. Numerous etiologies may lead to NIHF, and the underlying cause often remains unclear (1). The current standard of genetic diagnostic testing includes a fetal karyotype and chromosomal microarray (CMA), with an option to pursue single gene testing on amniocytes collected by amniocentesis (2). A large subgroup of the NIHF causes includes single gene disorders that are not diagnosed with the standard genetic workup for hydrops. Currently, nearly 1 in 5 cases of NIHF is defined as idiopathic, meaning there is no identified etiology (2). The investigators believe this is because the causes of NIHF are not completely investigated, specifically single gene disorders. Our research study aims to increase the diagnostic yield by performing whole exome sequencing (WES) and whole genome sequencing (WGS) on prenatal and neonatal NIHF cases when standard genetic testing is negative, identifying known and new genes, thus providing vital information to families regarding the specific diagnosis and risk to future pregnancies. The investigators plan to perform WES as the initial diagnostic test. If WES is negative, then the investigators will proceed to perform WGS.


Eligibility

Min Age: 16 YearsMax Age: 55 Years

Plain Language Summary

Simplified for easier understanding

This clinical trial, titled "Whole Exome Sequencing and Whole Genome Sequencing for Nonimmune Fetal/Neonatal Hydrops" (study ID: NCT03911531), is a genetic research study investigating the cause of nonimmune hydrops fetalis — a serious condition where abnormal fluid accumulates in a fetus or newborn. In many cases the cause is unknown, and standard chromosome tests come back normal. This study uses advanced genetic sequencing (whole exome and genome sequencing) to search for rare genetic mutations that might explain why hydrops occurs. The study enrolls pregnant women (or parents of affected newborns) where hydrops has been identified after the first trimester, and where standard testing including chromosome analysis and infection screening have not found a cause. Both parents must be available for blood sample collection. This study requires that an amniocentesis is already planned as part of routine workup. You may be eligible if you: - Have a fetus or newborn identified with hydrops (abnormal fluid accumulation) - The hydrops was identified after the first trimester of pregnancy - Standard chromosome and infection testing has been normal - Both parents are available to provide blood samples - The pregnancy was conceived without donor egg or sperm You may NOT be eligible if you: - Had an abnormal chromosome test result (karyotype or microarray) - Hydrops is caused by a confirmed infection or fetomaternal hemorrhage - Parental DNA cannot be obtained - Donor egg or donor sperm was used for conception - The fetus/infant has been diagnosed with a lysosomal storage disease - Either parent is under 16 years of age - Hydrops was diagnosed along with fetal death Talk to your doctor to see if this trial is right for you.

This summary was AI-generated to explain the trial in plain language. It is not medical advice. Always discuss eligibility with your doctor before enrolling in a clinical trial.

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Interventions

DIAGNOSTIC_TESTWhole Exome Sequencing

Whole exome sequencing (WES) provides more detailed information through greater resolution, identifying single base-pair changes and small insertions and deletions. WES performs sequencing on the protein-coding exons, which are contained in 1-2% of the genome but make up over 85% of all known pathogenic mutations.

DIAGNOSTIC_TESTWhole Genome Sequencing

Whole Genome Sequencing (WGS) has emerged in recent years as a diagnostic tool that sequences the entire genome and can pick up insertions or deletion of bases, structural variants and intronic single nucleotide variations.


Locations(1)

Thomas Jefferson University

Philadelphia, Pennsylvania, United States

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NCT03911531


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