RecruitingNCT07224841

Development of a cfDNA 5mC/5hmC-based Biomarker Panel to Predict Targeted Therapy Efficacy in mCRC

Development of a cfDNA 5mC/5hmC-based Epigenetic Biomarker Panel to Identify Determinants of Response In VEGF/EGFR-targeted Therapy for Metastatic Colorectal Cancer


Sponsor

City of Hope Medical Center

Enrollment

500 participants

Start Date

Jun 21, 2024

Study Type

OBSERVATIONAL

Conditions

Summary

The EpiDRIVE study aims to identify cfDNA-based epigenetic determinants of response in metastatic colorectal cancer (mCRC) patients treated with EGFR- or VEGF-targeted therapy. By integrating 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC) profiling, this study seeks to develop a predictive biomarker panel capable of differentiating responders from non-responders to targeted therapy.


Eligibility

Min Age: 18 Years

Inclusion Criteria5

  • Histologically confirmed metastatic colorectal adenocarcinoma (mCRC).
  • Received EGFR-targeted therapy (cetuximab/panitumumab) or VEGF-targeted therapy (bevacizumab).
  • Availability of pre-treatment plasma sample for cfDNA analysis.
  • Documented radiologic response evaluation (RECIST 1.1).
  • RAS/BRAF mutation status known.

Exclusion Criteria4

  • Inadequate cfDNA quality or low cfDNA yield.
  • Non-adenocarcinoma histology.
  • Concurrent or prior other active malignancy.
  • Active inflammatory or autoimmune disease affecting cfDNA methylation profiles.

Interventions

DIAGNOSTIC_TESTcfDNA 5mC/5hmC Sequencing (EpiDRIVE Discovery Phase)

High-throughput genome-wide sequencing of cfDNA methylation (5mC) and hydroxymethylation (5hmC) profiles from pre-treatment plasma samples in the discovery cohort to identify epigenetic determinants of targeted-therapy response (PFS ≥ 12 months vs \< 12 months).

DIAGNOSTIC_TESTEpiDRIVE Assay (Targeted Sequencing / qPCR Validation)

Targeted sequencing or qPCR-based validation of cfDNA 5mC/5hmC markers identified from the discovery phase to develop and validate a predictive biomarker model discriminating patients with long vs short progression-free survival after EGFR-/VEGF-targeted therapy.


Locations(1)

City of Hope Medical Center

Duarte, California, United States

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NCT07224841


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